Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891949.1_cds_XP_016446853.1_41671
CDS Infomation

[gene=LOC107771905] [db_xref=GeneID:107771905] [protein=probable membrane metalloprotease ARASP2, chloroplastic] [protein_id=XP_016446853.1] [location=complement(28253..29602)] [gbkey=CDS]
Sequence

ATGATTATAAACCTCTCCTCTTCTCCTTCTTCTTGTTCTCTCTCCCTCTCACAATTAATT
AATTCCAAATCACACATTTCTAAGTTCCATCTTAGGTCCAAAACTCACTTCTCAAAATCC
TTATCATCTTCTTCAGAAAAACTCATTTTTCATTCCAAGAATCAATTTTTACATGACAAG
AATATATACCCACTTAGCAGAAGAAAAAGGTTTAAAACTTGGGCCATTCCTGGGCTTGAT
TTTAGTGGATTTGAGAGTGCACAGTCAGTATTAGAAGCAGTTAGTGTATTGACAGCTATT
ATTGTAGTACATGAAAGTGGTCACTTTCTTGCTGCTTATCTCCAAGGTATTCATGTAAGT
AAATTTGCTGTTGGGTTTGGTCCAATCTTAGCTAAATTCAATGCCAAAAATGTTGAATAT
TCACTTAGAGCATTTCCTCTTGGTGGGTTTGTGGGGTTTCCTGATAATGATCCTGATAGT
GATATTCCCCCTGATGACAAAAATTTGCTCAAAAATAGACCTATATTTGATAGGGTGGTA
GTTATTTCAGCTGGTGTAATAGCTAATATAATCTTTGCTTATGTTATAATATTTACACAA
GTGTTGTTAGTTGGATTGCCTGTTCAAGAATCTTTCCCTGGAGTTCTTGTCCCTGATGTT
AGGCCTTTTTCAGCTGCATCTAGAGATGGATTACTTCCTGGTGATGTAATTTTAGGCTTA
AATGGAATTGAATTAGGGAAAAGTGGACCTAATTTGGTTTCTGAGGTTGTTGATGTCATT
AAGAAAAATCCAAAGAGAAATGTGTTGTTGAAAATAGGGAGAAGAGAAGGGAATGTTGAT
GTTAGAGTTACACCTGATGAGAATTCGGATGGTACGGGTAGGATTGGAGTTCAACTGTCA
CCAAATTTCAAGATTTCGAAAGTTCAGCCGAAGAATATATTTGAGGCTTTTAGCTTCTCA
GGAAGAGAATTTTGGGGTCTTACGTACAATGTTTTGGACAGTTTGAAACAGACTTTTATG
AACTTCTCACAAACGGCTAGTAAGGTATCGGGCCCTGTTGCCATTATAGCTGTTGGTGCT
GAAGTTGCAAAATCAAACATTGACGGCCTTTATCAATTTGCAGCTGTTTTGAATATCAAC
CTCGCGGTTATAAATCTCCTTCCTTTGCCTGCTTTGGATGGGGGTTCTTTAGCCTTGATT
CTTGTAGAAGCAGCTCGAGGTGGAAAAAAGCTTCCTTTAGAAGTAGAGCAACGGATTATG
TCATCTGGAATCATGTTTGTGCTCATTATTGGACTGTTCCTTCTAGTCCGTGATACTCTA
AACCTTGATTTTATCAGGGATTTGTTATAA

Peptide Sequence

PEP ID

XP_016446853.1
PEP Infomation

PREDICTED: probable membrane metalloprotease ARASP2, chloroplastic [Nicotiana tabacum]
Sequence

MIINLSSSPSSCSLSLSQLINSKSHISKFHLRSKTHFSKSLSSSSEKLIFHSKNQFLHDK
NIYPLSRRKRFKTWAIPGLDFSGFESAQSVLEAVSVLTAIIVVHESGHFLAAYLQGIHVS
KFAVGFGPILAKFNAKNVEYSLRAFPLGGFVGFPDNDPDSDIPPDDKNLLKNRPIFDRVV
VISAGVIANIIFAYVIIFTQVLLVGLPVQESFPGVLVPDVRPFSAASRDGLLPGDVILGL
NGIELGKSGPNLVSEVVDVIKKNPKRNVLLKIGRREGNVDVRVTPDENSDGTGRIGVQLS
PNFKISKVQPKNIFEAFSFSGREFWGLTYNVLDSLKQTFMNFSQTASKVSGPVAIIAVGA
EVAKSNIDGLYQFAAVLNINLAVINLLPLPALDGGSLALILVEAARGGKKLPLEVEQRIM
SSGIMFVLIIGLFLLVRDTLNLDFIRDLL

Transcript Sequence

Gene sequence data has not been registered.